<?xml version="1.0" encoding="utf-8" standalone="yes"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Published | CoBAI Lab</title><link>https://cobailab.github.io/tag/published/</link><atom:link href="https://cobailab.github.io/tag/published/index.xml" rel="self" type="application/rss+xml"/><description>Published</description><generator>Hugo Blox Builder (https://hugoblox.com)</generator><language>en-us</language><lastBuildDate>Tue, 14 Jul 2026 00:00:00 +0000</lastBuildDate><image><url>https://cobailab.github.io/media/icon_hu16861375505764986416.png</url><title>Published</title><link>https://cobailab.github.io/tag/published/</link></image><item><title>From scattering curves to structure: interpretable machine learning maps SAXS/WAXS signals to RNA structural details</title><link>https://cobailab.github.io/publication/saxs-waxs-ml-rna/</link><pubDate>Tue, 14 Jul 2026 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/saxs-waxs-ml-rna/</guid><description/></item><item><title>Accurate prediction of mechanical properties of organic crystals using molecular dynamics-based nanoindentation simulations</title><link>https://cobailab.github.io/publication/organic-crystal-nanoindentation/</link><pubDate>Fri, 03 Oct 2025 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/organic-crystal-nanoindentation/</guid><description/></item><item><title>Designing reversible photoswitching azobenzene-modified nucleotide for controlling biological function</title><link>https://cobailab.github.io/publication/photoswitchable-azobenzene-nucleotide/</link><pubDate>Fri, 13 Jun 2025 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/photoswitchable-azobenzene-nucleotide/</guid><description/></item><item><title>Sequence-dependent conformational preferences of disordered single-stranded RNA</title><link>https://cobailab.github.io/publication/disordered-ssrna-conformations/</link><pubDate>Tue, 29 Oct 2024 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/disordered-ssrna-conformations/</guid><description/></item><item><title>Mechanism of cationic lipid-induced DNA condensation: lipid-DNA coordination and divalent-cation charge fluctuations</title><link>https://cobailab.github.io/publication/cationic-lipid-dna-condensation/</link><pubDate>Tue, 16 Jul 2024 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/cationic-lipid-dna-condensation/</guid><description/></item><item><title>Atomistic structure of the SARS-CoV-2 pseudoknot in solution from SAXS-driven molecular dynamics</title><link>https://cobailab.github.io/publication/sars-cov-2-pseudoknot/</link><pubDate>Fri, 10 Nov 2023 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/sars-cov-2-pseudoknot/</guid><description/></item><item><title>Sequence-dependent orientational coupling and electrostatic attraction in cation-mediated DNA-DNA interactions</title><link>https://cobailab.github.io/publication/dna-orientational-coupling/</link><pubDate>Wed, 20 Sep 2023 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/dna-orientational-coupling/</guid><description/></item><item><title>Insights into the structural stability of major-groove RNA triplexes by WAXS-guided molecular dynamics simulations</title><link>https://cobailab.github.io/publication/rna-triplex-waxs-md/</link><pubDate>Mon, 11 Jul 2022 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/rna-triplex-waxs-md/</guid><description/></item><item><title>Refining the RNA force field with small-angle X-ray scattering of helix-junction-helix RNA</title><link>https://cobailab.github.io/publication/rna-force-field-saxs/</link><pubDate>Mon, 11 Apr 2022 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/rna-force-field-saxs/</guid><description/></item><item><title>Visualizing RNA structures by SAXS-driven molecular dynamics simulations</title><link>https://cobailab.github.io/publication/saxs-driven-rna-md/</link><pubDate>Fri, 18 Feb 2022 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/saxs-driven-rna-md/</guid><description/></item><item><title>The structural plasticity of nucleic acid duplexes revealed by WAXS and molecular dynamics</title><link>https://cobailab.github.io/publication/nucleic-acid-duplex-plasticity/</link><pubDate>Fri, 23 Apr 2021 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/nucleic-acid-duplex-plasticity/</guid><description/></item><item><title>Exploring cation-mediated DNA interactions using computer simulations</title><link>https://cobailab.github.io/publication/cation-mediated-dna-conference/</link><pubDate>Sat, 30 May 2020 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/cation-mediated-dna-conference/</guid><description/></item><item><title>Catalytic asymmetric radical aminoperfluoroalkylation and aminodifluoromethylation of alkenes with fluoroalkylsulfonyl chlorides: a versatile platform for enantioenriched β-fluoroalkyl amines</title><link>https://cobailab.github.io/publication/asymmetric-aminoperfluoroalkylation/</link><pubDate>Thu, 23 Mar 2017 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/asymmetric-aminoperfluoroalkylation/</guid><description/></item><item><title>Asymmetric construction of spirooxindoles via organocatalytic multicomponent reactions of diazooxindoles</title><link>https://cobailab.github.io/publication/spirooxindoles/</link><pubDate>Thu, 02 Jul 2015 00:00:00 +0000</pubDate><guid>https://cobailab.github.io/publication/spirooxindoles/</guid><description/></item></channel></rss>